| Gene ID | Contig7012_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g57730: zinc finger (C3HC4-type RING finger) family protein (HF=6e+0) |
| Module size | 9 genes |
| NF | 0.38 |
| %ile | 52.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.94 | 98.9 | 0.88 | Contig7012_at | Contig7012 | - | - | 6e+0 | At1g57730 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.55 | 72.0 | 0.80 | Contig11772_at | Contig11772 | - | - | 1e-31 | At1g21065 | unknown protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.9 | 0.81 | Contig634_at | Contig634 | hypothetical LOC548258 | - | 7e+0 | At5g35620 | LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) | O.I. | H.G. | S.X. | |
| 0.35 | 45.1 | 0.94 | HX01F12w_at | HX01F12w | - | - | 5e+0 | At5g18920 | unknown protein | O.I. | H.G. | S.X. | |
| 0.33 | 42.6 | 0.94 | Contig2411_at | Contig2411 | - | - | 2e-2 | At4g21280 | oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | O.I. | H.G. | S.X. | |
| 0.23 | 26.1 | 0.92 | Contig20310_at | Contig20310 | - | - | 3e+0 | At5g56370 | F-box family protein | O.I. | H.G. | S.X. | |
| 0.22 | 24.2 | 0.95 | Contig11690_at | Contig11690 | - | - | 9e-13 | At4g09810 | transporter-related | O.I. | H.G. | S.X. | |
| 0.21 | 22.6 | 0.96 | HA12K13u_s_at | HA12K13u | - | - | 2e-19 | At1g52740 | HTA9 (HISTONE H2A PROTEIN 9) | O.I. | H.G. | S.X. | |
| 0.15 | 14.1 | 0.95 | Contig11410_at | Contig11410 | - | - | 4e-1 | At5g47150 | YDG/SRA domain-containing protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 22.9 | 99.8 | GSM238412 | Endosperm 4DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 20.7 | 99.7 | GSM238413 | Endosperm 4DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 9.9 | 99.1 | GSM238410 | Pericarp 8DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 6.2 | 98.0 | GSM238408 | Pericarp 4DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.2 | 97.4 | GSM146373 | Golden Promise shoot Salt, biological rep 2 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.6 | 96.8 | GSM146371 | Golden Promise shoot Control, biological rep 3 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.3 | 96.4 | GSM146379 | Maythorpe shoot Salt, biological rep 2 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.2 | 96.3 | GSM146377 | Maythorpe shoot Control, biological rep 3 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.1 | 96.2 | GSM146370 | Golden Promise shoot Control, biological rep 2 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.0 | 96.0 | GSM431547 | pathogen isolates: Mock - rep2 | GSE17238 | Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis | |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage