Co-expression analysis

Gene ID Contig6763_at
Gene name
Homology with ArabidopsisSimilar to At5g26710: glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative (HF=1e-11)
Module size 6 genes
NF 0.45
%ile 62.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.96Contig6763_atContig6763--1e-11At5g26710glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putativeO.I.H.G.S.X.
0.8394.00.93Contig7500_atContig7500--3e-12At5g35460unknown proteinO.I.H.G.S.X.
0.8394.00.95Contig7501_atContig7501--5e-2At4g38810calcium-binding EF hand family proteinO.I.H.G.S.X.
0.8092.50.96Contig6602_atContig6602core3ft protein-2e-10At3g19280FUT11 (FUCOSYLTRANSFERASE 11)O.I.H.G.S.X.
0.4458.90.96Contig6651_atContig6651--2e-3At1g42480unknown proteinO.I.H.G.S.X.
0.1514.10.94Contig3497_atContig3497--4e+0At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.799.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.797.7GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.997.1GSM146376Maythorpe shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.997.1GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.997.1GSM146380Maythorpe shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.696.8GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.596.7GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.496.6GSM130800control, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
4.496.6GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM146371Golden Promise shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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