Co-expression analysis

Gene ID Contig6757_at
Gene name
Homology with ArabidopsisSimilar to At1g72550: tRNA synthetase beta subunit family protein (HF=3e-4)
Module size 6 genes
NF 0.49
%ile 68.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.96Contig6757_atContig6757--3e-4At1g72550tRNA synthetase beta subunit family proteinO.I.H.G.S.X.
0.4356.40.95Contig6469_atContig6469--3e-37At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.4053.10.96Contig5368_atContig5368--2e+0At3g46150unknown proteinO.I.H.G.S.X.
0.4053.10.96Contig9715_s_atContig9715--8e+0At4g35350XCP1 (XYLEM CYSTEINE PEPTIDASE 1)O.I.H.G.S.X.
0.3950.50.96Contig8166_atContig8166--4e-11At5g49940NFU2 (NIFU-LIKE PROTEIN 2)O.I.H.G.S.X.
0.3342.60.96Contig1122_s_atContig1122--1e-22At1g07790HTB1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.699.0GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
8.798.9GSM261037Dicktoo-subzero-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
7.198.4GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
5.097.2GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.795.5GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.795.5GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.394.6GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.093.8GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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