Co-expression analysis

Gene ID	Contig6745_at
Gene name
Homology with Arabidopsis	Similar to At5g28950: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.64
%ile	86.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.1	0.91	Contig6745_at	Contig6745	-	-	3e+0	At5g28950	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.90	Contig1181_x_at	Contig1181	-	-	8e-15	At5g59910	HTB4	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig11655_at	Contig11655	-	-	2e+0	At3g29385	-	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.90	HS09G19u_s_at	HS09G19u	-	-	1e+1	At5g22280	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.89	HD08H17r_at	HD08H17r	-	-	3e+1	At5g39330	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.89	Contig17931_at	Contig17931	-	-	1e-1	At1g16560	Per1-like family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.6	99.6	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.5	97.6	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.4	97.5	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.8	97.0	GSM372987	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.9	95.8	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
3.7	95.5	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.4	94.8	GSM238416	Endosperm 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.3	94.6	GSM372999	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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