Co-expression analysis

Gene ID	Contig6656_at
Gene name
Homology with Arabidopsis	Similar to At1g66560: WRKY64 (HF=2e+0)
Module size	6 genes
NF	0.54
%ile	75.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.96	Contig6656_at	Contig6656	-	-	2e+0	At1g66560	WRKY64	O.I.	H.G.	S.X.	Please select
0.56	74.3	0.97	HI05P18u_s_at	HI05P18u	-	-	4e+0	At3g50695	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.97	Contig20343_at	Contig20343	-	-	3e-1	At2g20805	-	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.97	Contig3680_s_at	Contig3680	-	-	3e-13	At4g24920	protein transport protein SEC61 gamma subunit, putative	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.96	HA31E10r_s_at	HA31E10r	-	-	1e+0	At4g15620	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.97	Contig11475_at	Contig11475	-	-	1e-59	At3g11540	SPY (SPINDLY)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.7	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.3	97.4	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.9	97.1	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.9	97.1	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.8	97.0	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.9	95.8	GSM261067	Xantha s-46 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.8	95.7	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM261061	Xantha b-12 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.3	94.6	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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