Co-expression analysis

Gene ID Contig6632_at
Gene name
Homology with ArabidopsisSimilar to At5g37200: zinc finger (C3HC4-type RING finger) family protein (HF=2e-3)
Module size 8 genes
NF 0.47
%ile 66.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6380.30.96Contig6632_atContig6632--2e-3At5g37200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.8694.80.96Contig540_x_atContig540--5e-1At5g53590auxin-responsive family proteinO.I.H.G.S.X.
0.5369.70.97HD13H12r_s_atHD13H12r--2e-1At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.4053.10.96HK06B02r_s_atHK06B02r--1e-5At3g43810CAM7 (CALMODULIN 7)O.I.H.G.S.X.
0.4053.10.96Contig5444_s_atContig5444--1e+0At5g51210OLEO3 (OLEOSIN3)O.I.H.G.S.X.
0.3647.10.97HW03D07u_s_atHW03D07u--8e-1At3g52230unknown proteinO.I.H.G.S.X.
0.3545.10.97HW08B21u_s_atHW08B21u--1e+1At5g23903unknown proteinO.I.H.G.S.X.
0.3037.00.96Contig30_s_atContig30--4e-19At5g59690histone H4O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.499.0GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
9.399.0GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.097.2GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
5.097.2GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.796.9GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.596.7GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.394.6GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.194.1GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
2.893.1GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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