Co-expression analysis

Gene ID	Contig6604_s_at
Gene name
Homology with Arabidopsis	Similar to At1g18100: E12A11 (HF=1e-4)
Module size	11 genes
NF	0.43
%ile	59.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.94	Contig6604_s_at	Contig6604	-	-	1e-4	At1g18100	E12A11	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	Contig5213_at	Contig5213	-	-	2e-11	At5g61020	ECT3	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.97	Contig4193_at	Contig4193	-	-	1e-5	At5g58970	ATUCP2 (UNCOUPLING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.97	Contig336_at	Contig336	-	-	4e-1	At5g66580	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig8442_at	Contig8442	-	-	5e-24	At1g34470	permease-related	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.96	Contig333_3_x_at	Contig333_3	-	-			-	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.97	Contig8857_at	Contig8857	-	-	4e-1	At2g37600	60S ribosomal protein L36 (RPL36A)	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.95	Contig1353_s_at	Contig1353	-	-	1e-1	At4g11300	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.96	Contig15062_at	Contig15062	-	-	1e-1	At4g25440	ZFWD1 (zinc finger WD40 repeat protein 1)	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.97	Contig3470_at	Contig3470	-	-	1e-11	At2g37340	RSZ33	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.96	Contig576_s_at	Contig576	-	-	2e-21	At5g59690	histone H4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.9	99.5	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
7.3	98.5	GSM213436	Barley seeds with P. aeruginosa PAO1 for 12hr	GSE8618	P. aeruginosa virulent factor to barley
6.0	97.9	GSM213443	Barley seeds with P. aeruginosa PA5021 mutant for 12hr	GSE8618	P. aeruginosa virulent factor to barley
5.4	97.5	GSM398273	Moroc9-75_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.2	97.4	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.5	96.7	GSM261054	Bonus Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.4	96.6	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.3	96.4	GSM398249	Martin_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.2	96.3	GSM261053	Bonus Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.1	96.2	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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