Co-expression analysis

Gene ID Contig6525_at
Gene name
Homology with ArabidopsisSimilar to At5g62640: proline-rich family protein (HF=1e-3)
Module size 6 genes
NF 0.07
%ile 9.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.2326.10.71Contig6525_atContig6525--1e-3At5g62640proline-rich family proteinO.I.H.G.S.X.
0.2427.20.73S0001000055P18F1_s_atS0001000055P18F1--6e+0At4g28310unknown proteinO.I.H.G.S.X.
0.1919.60.78Contig15960_atContig15960--3e-2At4g03180unknown proteinO.I.H.G.S.X.
0.086.50.77Contig24887_atContig24887--1e+0At4g35650isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.032.60.83Contig2163_atContig2163--3e-1At2g04046-O.I.H.G.S.X.
0.032.60.76Contig9920_atContig9920--7e-1At3g15095unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.198.4GSM373007genotype: 11542 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.197.3GSM373004genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
3.995.8GSM373005genotype: 11542 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM373001genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372998genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.194.1GSM373008genotype: 11542 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.194.1GSM688923 h salt stressed replicate 1GSE3097Barley1 salinity stress studyLink to GEO
3.093.8GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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