Co-expression analysis

Gene ID Contig650_at
Gene name
Homology with ArabidopsisSimilar to At2g37600: 60S ribosomal protein L36 (RPL36A) (HF=5e-34)
Module size 9 genes
NF 0.43
%ile 59.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.95Contig650_atContig650--5e-34At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.6380.30.96Contig6509_atContig6509--4e-21At5g12040carbon-nitrogen hydrolase family proteinO.I.H.G.S.X.
0.5774.90.96Contig6545_atContig6545--1e-2At1g14250nucleoside phosphatase family protein / GDA1/CD39 family proteinO.I.H.G.S.X.
0.5268.30.96Contig642_atContig642--4e-5At4g08930ATAPRL6 (APR-like 6)O.I.H.G.S.X.
0.4863.20.96Contig8973_atContig8973--5e-10At3g47930ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)O.I.H.G.S.X.
0.4356.40.96Contig6546_atContig6546--8e+0At5g02780In2-1 protein, putativeO.I.H.G.S.X.
0.3849.50.96rbah36l17_s_atrbah36l17--7e-30At1g30580GTP bindingO.I.H.G.S.X.
0.3849.50.96Contig5361_atContig5361--3e+0At4g29103unknown proteinO.I.H.G.S.X.
0.2021.10.95Contig10032_atContig10032--7e-3At5g09850transcription elongation factor-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.795.5GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.695.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.595.1GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
3.093.8GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.093.8GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.093.8GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.893.1GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.893.1GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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