Co-expression analysis

Gene ID	Contig650_at
Gene name
Homology with Arabidopsis	Similar to At2g37600: 60S ribosomal protein L36 (RPL36A) (HF=5e-34)
Module size	9 genes
NF	0.43
%ile	59.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	78.7	0.95	Contig650_at	Contig650	-	-	5e-34	At2g37600	60S ribosomal protein L36 (RPL36A)	O.I.	H.G.	S.X.	Please select
0.63	80.3	0.96	Contig6509_at	Contig6509	-	-	4e-21	At5g12040	carbon-nitrogen hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.96	Contig6545_at	Contig6545	-	-	1e-2	At1g14250	nucleoside phosphatase family protein / GDA1/CD39 family protein	O.I.	H.G.	S.X.	Please select
0.52	68.3	0.96	Contig642_at	Contig642	-	-	4e-5	At4g08930	ATAPRL6 (APR-like 6)	O.I.	H.G.	S.X.	Please select
0.48	63.2	0.96	Contig8973_at	Contig8973	-	-	5e-10	At3g47930	ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.96	Contig6546_at	Contig6546	-	-	8e+0	At5g02780	In2-1 protein, putative	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.96	rbah36l17_s_at	rbah36l17	-	-	7e-30	At1g30580	GTP binding	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.96	Contig5361_at	Contig5361	-	-	3e+0	At4g29103	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.95	Contig10032_at	Contig10032	-	-	7e-3	At5g09850	transcription elongation factor-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	95.5	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.7	95.5	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.6	95.3	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.5	95.1	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.5	95.1	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
3.0	93.8	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.0	93.8	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.0	93.8	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
2.8	93.1	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
2.8	93.1	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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