Co-expression analysis

Gene ID Contig6433_at
Gene name
Homology with ArabidopsisSimilar to At5g66460: (1-4)-beta-mannan endohydrolase, putative (HF=5e-1)
Module size 6 genes
NF 0.41
%ile 56.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.30.89Contig6433_atContig6433--5e-1At5g66460(1-4)-beta-mannan endohydrolase, putativeO.I.H.G.S.X.
0.8394.00.89Contig6431_atContig6431--3e-1At2g18110elongation factor 1-beta, putative / EF-1-beta, putativeO.I.H.G.S.X.
0.5572.00.89HVSMEb0006I05f_x_atHVSMEb0006I05f--8e-1At5g19930integral membrane family proteinO.I.H.G.S.X.
0.4762.20.90Contig5728_atContig5728--1e-15At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.
0.2224.20.89Contig6836_atContig6836--6e-11At1g27650ATU2AF35AO.I.H.G.S.X.
0.2224.20.89Contig9794_atContig9794--4e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.5GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.198.0GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.697.7GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.497.5GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.297.4GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.197.3GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.097.2GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.897.0GSM440973Stressed awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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