Co-expression analysis

Gene ID	Contig642_at
Gene name
Homology with Arabidopsis	Similar to At4g08930: ATAPRL6 (APR-like 6) (HF=4e-5)
Module size	7 genes
NF	0.51
%ile	71.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.96	Contig642_at	Contig642	-	-	4e-5	At4g08930	ATAPRL6 (APR-like 6)	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.96	Contig6545_at	Contig6545	-	-	1e-2	At1g14250	nucleoside phosphatase family protein / GDA1/CD39 family protein	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.96	Contig6546_at	Contig6546	-	-	8e+0	At5g02780	In2-1 protein, putative	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	rbah36l17_s_at	rbah36l17	-	-	7e-30	At1g30580	GTP binding	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.97	Contig5361_at	Contig5361	-	-	3e+0	At4g29103	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig660_s_at	Contig660	-	-	1e-37	At1g09200	histone H3	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.97	Contig6751_at	Contig6751	-	-	1e+0	At3g04990	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.4	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.6	96.8	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.9	95.8	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.7	95.5	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.7	95.5	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.6	95.3	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
3.5	95.1	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.4	94.8	GSM440973	Stressed awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
2.9	93.4	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.8	93.1	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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