Co-expression analysis

Gene ID Contig6351_at
Gene name
Homology with ArabidopsisSimilar to At1g42560: MLO9 (MILDEW RESISTANCE LOCUS O 9) (HF=3e-4)
Module size 6 genes
NF 0.77
%ile 95.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.96Contig6351_atContig6351--3e-4At1g42560MLO9 (MILDEW RESISTANCE LOCUS O 9)O.I.H.G.S.X.
0.8394.00.97Contig5096_atContig5096--2e-12At4g16660heat shock protein 70, putative / HSP70, putativeO.I.H.G.S.X.
0.7790.80.96Contig14052_atContig14052--4e-10At5g53130CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)O.I.H.G.S.X.
0.6178.70.96Contig7819_atContig7819--1e-2At5g02502unknown proteinO.I.H.G.S.X.
0.6077.30.97Contig13861_atContig13861--5e-1At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.4458.90.97Contig13821_atContig13821--5e-4At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.099.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
11.399.3GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
9.699.0GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
8.998.9GSM146376Maythorpe shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.698.6GSM146371Golden Promise shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.498.5GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.498.5GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.298.5GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
6.898.3GSM146380Maythorpe shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.598.2GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.280.1.S1_s_at, orthologous to the query gene, Contig6351_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5779.2Ta.280.1.S1_s_atAt1g42560MLo1 protein /// MLo protein /// seven transmembrane-spanning protein-6e-2At1g42560MLO9 (MILDEW RESISTANCE LOCUS O 9)O.I.H.G.S.X.
0.7288.3Ta.6155.2.S1_a_atAt1g42560--3e-1At5g55340long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.7087.2Ta.22249.1.S1_atAt1g42560--3e+0At1g13880ELM2 domain-containing proteinO.I.H.G.S.X.
0.6081.0TaAffx.35394.2.A1_atAt1g42560--3e+0At5g50480NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6)O.I.H.G.S.X.
0.5678.6Ta.27812.1.A1_atAt1g42560--1e+0At2g25735unknown proteinO.I.H.G.S.X.
0.4666.8TaAffx.10874.1.S1_atAt1g42560--5e-1At4g02430pre-mRNA splicing factor, putative / SR1 protein, putativeO.I.H.G.S.X.
0.4464.5Ta.6155.1.S1_atAt1g42560--1e-1At3g08890unknown proteinO.I.H.G.S.X.
0.4159.6TaAffx.108578.1.S1_x_atAt1g42560--1e-1At5g08330TCP family transcription factor, putativeO.I.H.G.S.X.
0.3346.9TaAffx.113370.1.S1_atAt1g42560--2e-1At5g20165unknown proteinO.I.H.G.S.X.
0.3346.9TaAffx.10874.3.S1_s_atAt1g42560--2e+1At2g39160unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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