Co-expression analysis

Gene ID	Contig6338_at
Gene name
Homology with Arabidopsis	Similar to At5g10890: myosin heavy chain-related (HF=3e-1)
Module size	7 genes
NF	0.49
%ile	67.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.3	0.92	Contig6338_at	Contig6338	-	-	3e-1	At5g10890	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.95	Contig12520_at	Contig12520	-	-	4e-1	At5g61880	signaling molecule-related	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.93	Contig2594_s_at	Contig2594	-	-	4e-42	At5g10860	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.92	Contig15554_at	Contig15554	-	-	1e+0	At2g39490	F-box family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig26251_at	Contig26251	-	-	2e+0	At3g16970	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	HU08B06u_x_at	HU08B06u	-	-	1e-21	At2g36530	LOS2	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.92	Contig11510_at	Contig11510	-	-	6e-1	At5g67490	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	97.9	GSM282027	Malting_day1_Legacy_rep2	GSE11200	Expression data from malting barley seeds
5.6	97.7	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.4	97.5	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.7	96.9	GSM282039	Malting_day4_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.6	96.8	GSM282029	Malting_day1_Merit_rep3	GSE11200	Expression data from malting barley seeds
4.0	96.0	GSM282028	Malting_day1_Merit_rep1	GSE11200	Expression data from malting barley seeds
3.5	95.1	GSM282024	Malting_day4_Merit_rep2	GSE11200	Expression data from malting barley seeds
3.5	95.1	GSM213443	Barley seeds with P. aeruginosa PA5021 mutant for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.4	94.8	GSM282021	Malting_day4_Legacy_rep 2	GSE11200	Expression data from malting barley seeds
3.4	94.8	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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