Co-expression analysis

Gene ID	Contig624_at
Gene name
Homology with Arabidopsis	Similar to At2g31390: pfkB-type carbohydrate kinase family protein (HF=3e-3)
Module size	6 genes
NF	0.51
%ile	70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	75.8	0.97	Contig624_at	Contig624	-	-	3e-3	At2g31390	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.97	Contig20475_at	Contig20475	-	-	2e+0	At2g23067	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.96	Contig20343_at	Contig20343	-	-	3e-1	At2g20805	-	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.97	Contig7044_at	Contig7044	-	-	4e-3	At5g42090	-	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig5311_at	Contig5311	O-methyltransferase	-	7e-1	At1g62900	O-methyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.97	Contig3680_s_at	Contig3680	-	-	3e-13	At4g24920	protein transport protein SEC61 gamma subunit, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.7	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.6	97.7	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.1	96.2	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.0	96.0	GSM261042	before 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.9	95.8	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM261044	before 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.6	95.3	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.0	93.8	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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