| Gene ID | Contig6233_s_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g08790: ATAF2 (HF=3e-8) |
| Module size | 6 genes |
| NF | 0.66 |
| %ile | 87.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.1 | 0.88 | Contig6233_s_at | Contig6233 | - | - | 3e-8 | At5g08790 | ATAF2 | O.I. | H.G. | S.X. | |
| 0.77 | 90.8 | 0.87 | Contig6238_s_at | Contig6238 | - | - | 1e-7 | At2g30860 | ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9) | O.I. | H.G. | S.X. | |
| 0.60 | 77.3 | 0.90 | Contig6235_s_at | Contig6235 | - | - | 1e+0 | At3g27850 | RPL12-C (ribosomal protein l12-c) | O.I. | H.G. | S.X. | |
| 0.55 | 72.0 | 0.88 | Contig15767_at | Contig15767 | - | - | 1e-1 | At1g21520 | unknown protein | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.87 | Contig6433_at | Contig6433 | - | - | 5e-1 | At5g66460 | (1-4)-beta-mannan endohydrolase, putative | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.90 | Contig6431_at | Contig6431 | - | - | 3e-1 | At2g18110 | elongation factor 1-beta, putative / EF-1-beta, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.2 | 99.1 | GSM261072 | Albina f-17 Hardened rep2 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 9.1 | 98.9 | GSM261073 | Albina f-17 Hardened rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 7.8 | 98.6 | GSM261067 | Xantha s-46 Hardened rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 7.2 | 98.5 | GSM261061 | Xantha b-12 Hardened rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 7.1 | 98.4 | GSM440972 | Stressed awn_Rep1 | GSE17669 | Gene expression in the barley spike during drought stress | |
| 7.1 | 98.4 | GSM261071 | Albina f-17 Hardened rep1 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 5.7 | 97.7 | GSM261077 | Albina e-16 Hardened rep1 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 5.6 | 97.7 | GSM261079 | Albina e-16 Hardened rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 5.5 | 97.6 | GSM261066 | Xantha s-46 Hardened rep2 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 5.2 | 97.4 | GSM440974 | Stressed awn_Rep3 | GSE17669 | Gene expression in the barley spike during drought stress | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.97 | 99.9 | Os11g0184900 | At5g08790 | - | OsNAC5 protein | 6e-2 | At5g08790 | ATAF2 | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | Os02g0201300 | At5g08790 | - | Conserved hypothetical protein | 2e+0 | At5g61412 | unknown protein | O.I. | H.G. | S.X. | |
| 0.28 | 31.1 | Os01g0595400 | At5g08790 | - | Protein of unknown function DUF538 family protein | 4e-1 | At2g30560 | glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os04g0623300 | At5g08790 | - | Flavin-containing amine oxidase family protein | 2e-18 | At2g43020 | ATPAO2 (Polyamine oxidase 2) | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os03g0419100 | At5g08790 | - | Conserved hypothetical protein | 2e-1 | At1g13740 | AFP2 (ABI FIVE BINDING PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | Os02g0149800 | At5g08790 | - | Protein phosphatase 2C family protein | 3e-28 | At4g31750 | WIN2 (HOPW1-1-INTERACTING 2) | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | Os05g0529200 | At5g08790 | - | Enoyl-CoA hydratase/isomerase domain containingprotein | 1e-1 | At1g65520 | ECI1 (DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1) | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os04g0556300 | At5g08790 | - | Glutathione peroxidase-like protein GPX54Hv | 3e-33 | At4g11600 | ATGPX6 (GLUTATHIONE PEROXIDASE 6) | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os01g0876400 | At5g08790 | - | - | 4e-7 | At1g71360 | - | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os05g0138300 | At5g08790 | - | Hydrophobic protein RCI2A (Low temperature andsalt responsive protein LTI6A) | 5e-1 | At5g01940 | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os11g0588300 | At5g08790 | - | Glutathione transferase AtGST 10 (EC 2.5.1.18) | 2e-3 | At5g41210 | ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os03g0302000 | At5g08790 | - | Peroxisomal biogenesis factor 11 family protein | 2e+0 | At4g12450 | unknown protein | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os09g0504700 | At5g08790 | - | Hypothetical protein | 2e+0 | At5g23950 | C2 domain-containing protein | O.I. | H.G. | S.X. | |
| 0.18 | 13.7 | Os02g0752800 | At5g08790 | - | Dehydration responsive element binding protein 2B(DREB2B protein) | 7e-5 | At2g22200 | AP2 domain-containing transcription factor | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os04g0491700 | At5g08790 | - | General substrate transporter family protein | 4e-7 | At4g16480 | INT4 (INOSITOL TRANSPORTER 4) | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os03g0843100 | At5g08790 | - | Ras-related protein Rab-11B | 4e-11 | At1g09630 | ATRAB11C (ARABIDOPSIS RAB GTPASE 11C) | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os09g0542100 | At5g08790 | - | Peptidase A1, pepsin family protein | 9e-1 | At4g35880 | aspartyl protease family protein | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os02g0735900 | At5g08790 | - | The start codon is not identified. | 2e+0 | At1g68070 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os03g0567600 | At5g08790 | - | Protein of unknown function DUF563 family protein | 1e-3 | At5g58000 | - | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os04g0595200 | At5g08790 | - | Protein of unknown function DUF59 domaincontaining protein | 2e-13 | At1g68310 | vacuolar sorting signal binding | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os06g0301100 | At5g08790 | - | Hypothetical protein | 1e-1 | At2g45110 | ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4) | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os01g0157900 | At5g08790 | - | Uncharacterized Cys-rich domain containing protein | 6e-4 | At2g37110 | unknown protein | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os01g0758400 | At5g08790 | - | Phosphatidate cytidylyltransferase (EC 2.7.7.41)(CDP-diglyceride synthetase) (CDP-diglyceridepyrophosphorylase) (CDP-diacylglycerol synthase) (CDS)(CTP:phosphatidate cytidylyltransferase) (CDP-DAGsynthase) (CDP-DG synthetase) | 5e-18 | At4g22340 | phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os01g0349400 | At5g08790 | - | Serine/threonine protein phosphatase PP1 (EC3.1.3.16) | 5e-8 | At3g05580 | serine/threonine protein phosphatase, putative | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os07g0658100 | At5g08790 | - | Conserved hypothetical protein | 2e-3 | At2g47115 | unknown protein | O.I. | H.G. | S.X. | |
| 0.11 | 6.5 | Os02g0628800 | At5g08790 | - | Ubiquitin-like protein 5 | 2e-30 | At3g45180 | ubiquitin family protein | O.I. | H.G. | S.X. | |
| 0.09 | 4.9 | Os08g0455800 | At5g08790 | - | Protein of unknown function DUF985 family protein | 5e-1 | At2g20170 | unknown protein | O.I. | H.G. | S.X. | |
| 0.09 | 4.9 | Os11g0600700 | At5g08790 | - | Zn-finger, RING domain containing protein | 1e-8 | At5g62460 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.08 | 4.2 | Os08g0159100 | At5g08790 | - | CD9/CD37/CD63 antigen family protein | 7e-1 | At2g10550 | - | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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