Co-expression analysis

Gene ID Contig61_s_at
Gene name
Homology with ArabidopsisSimilar to At3g06780: glycine-rich protein (HF=5e-3)
Module size 9 genes
NF 0.50
%ile 70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.82Contig61_s_atContig61--5e-3At3g06780glycine-rich proteinO.I.H.G.S.X.
0.7086.00.87Contig6997_atContig6997--2e-1At4g39140protein binding / zinc ion bindingO.I.H.G.S.X.
0.6380.30.92Contig5149_atContig5149--4e-2At1g66670CLPP3O.I.H.G.S.X.
0.5975.80.87Contig20580_atContig20580--7e+0At3g18560unknown proteinO.I.H.G.S.X.
0.4356.40.88Contig5806_atContig5806--4e+0At3g03880unknown proteinO.I.H.G.S.X.
0.4255.20.87Contig14037_atContig14037--5e+0At4g32090galactosyltransferaseO.I.H.G.S.X.
0.4153.90.89Contig11168_atContig11168--1e-15At5g12480CPK7 (calmodulin-domain protein kinase 7)O.I.H.G.S.X.
0.3037.00.91Contig11041_atContig11041--1e+0At3g08940LHCB4.2 (light harvesting complex PSII)O.I.H.G.S.X.
0.3037.00.88Contig6996_atContig6996--5e-2At1g23850unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.698.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
7.798.6GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
7.398.5GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.498.1GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.795.5GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.294.3GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM372988genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM372982genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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