Co-expression analysis

Gene ID Contig6173_at
Gene name
Homology with ArabidopsisSimilar to At3g21180: ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) (HF=2e-36)
Module size 6 genes
NF 0.77
%ile 95.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.79Contig6173_atContig6173--2e-36At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)O.I.H.G.S.X.
0.8394.00.86HVSMEf0005G15r2_x_atHVSMEf0005G15r2--5e+0At5g16567unknown proteinO.I.H.G.S.X.
0.7388.70.79Contig23069_atContig23069--2e-2At5g50490NF-YC5 (NUCLEAR FACTOR Y, SUBUNIT C5)O.I.H.G.S.X.
0.5572.00.74Contig6170_s_atContig6170--1e-1At4g27890nuclear movement family proteinO.I.H.G.S.X.
0.5066.90.85Contig12575_atContig12575--6e-1At1g70580AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.895.7GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.494.8GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.494.8GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.394.6GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
3.194.1GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.093.8GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.093.8GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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