Co-expression analysis

Gene ID	Contig6023_s_at
Gene name
Homology with Arabidopsis	Similar to At4g12230: esterase/lipase/thioesterase family protein (HF=3e-12)
Module size	6 genes
NF	0.40
%ile	54.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	75.8	0.96	Contig6023_s_at	Contig6023	-	-	3e-12	At4g12230	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig15978_at	Contig15978	-	-	4e-1	At2g18250	ATCOAD (4-phosphopantetheine adenylyltransferase)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig10218_at	Contig10218	-	-	2e+0	At2g44820	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	HX04E17u_s_at	HX04E17u	-	-	1e+0	At5g12340	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.96	Contig10012_at	Contig10012	-	-	6e-8	At5g24630	BIN4 (brassinosteroid-insensitive4)	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.96	Contig12918_at	Contig12918	-	-	3e+1	At5g02280	synbindin, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.8	99.9	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
22.7	99.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
14.3	99.5	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.0	99.1	GSM146364	Maythorpe Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.4	99.0	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.7	98.6	GSM146367	Maythorpe Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.6	98.2	GSM146361	Golden Promise Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.2	98.0	GSM419973	Lemma_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.2	98.0	GSM440958	Control lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.9	97.9	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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