| Gene ID | Contig5966_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At4g33360: terpene cyclase/mutase-related (HF=9e-2) |
| Module size | 6 genes |
| NF | 0.63 |
| %ile | 85.3 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.1 | 0.91 | Contig5966_at | Contig5966 | - | - | 9e-2 | At4g33360 | terpene cyclase/mutase-related | O.I. | H.G. | S.X. | |
| 0.67 | 84.7 | 0.91 | Contig5969_at | Contig5969 | - | - | 7e-4 | At1g64970 | G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE) | O.I. | H.G. | S.X. | |
| 0.67 | 84.7 | 0.93 | Contig10453_at | Contig10453 | - | - | 9e-1 | At5g19485 | transferase | O.I. | H.G. | S.X. | |
| 0.50 | 66.9 | 0.94 | Contig13318_at | Contig13318 | - | - | 1e-2 | At3g59010 | pectinesterase family protein | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.91 | EBpi01_SQ002_O15_at | EBpi01_SQ002_O15 | - | - | 2e+0 | At5g47130 | Bax inhibitor-1 family / BI-1 family | O.I. | H.G. | S.X. | |
| 0.38 | 49.5 | 0.89 | Contig5809_at | Contig5809 | - | - | 2e-14 | At1g58440 | XF1 | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 5.5 | 97.6 | GSM261045 | after 3 days in mannitol medium rep1 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 5.2 | 97.4 | GSM261047 | after 3 days in mannitol medium rep3 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 4.7 | 96.9 | GSM238435 | Embryo 24 h; Seed germination; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.7 | 96.9 | GSM213441 | Barley seeds control in Hoagland solution for 12hr | GSE8618 | P. aeruginosa virulent factor to barley | |
| 4.5 | 96.7 | GSM238436 | Embryo 48 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.2 | 96.3 | GSM146369 | Golden Promise shoot Control, biological rep1 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.1 | 96.2 | GSM261026 | ABA-Early-rep3 | GSE10328 | ABA experiment | |
| 4.0 | 96.0 | GSM238434 | Embryo 24 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.7 | 95.5 | GSM261046 | after 3 days in mannitol medium rep2 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 3.6 | 95.3 | GSM68889 | 3 h control replicate 1 | GSE3097 | Barley1 salinity stress study | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | Zm.5273.1.A1_at | At4g33360 | hypothetical protein LOC100272886 | - | 7e-1 | At2g39990 | EIF2 | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | Zm.14034.1.A1_at | At4g33360 | hypothetical protein LOC100273157 | - | 4e-14 | At5g53140 | protein phosphatase 2C, putative / PP2C, putative | O.I. | H.G. | S.X. | |
| 0.59 | 76.1 | Zm.1056.1.S1_at | At4g33360 | ribosomal protein S22 homolog | - | 3e-17 | At5g62300 | 40S ribosomal protein S20 (RPS20C) | O.I. | H.G. | S.X. | |
| 0.38 | 44.2 | Zm.3620.1.S1_at | At4g33360 | - | - | 5e+0 | At5g28610 | - | O.I. | H.G. | S.X. | |
| 0.25 | 21.3 | Zm.4164.1.A1_x_at | At4g33360 | - | - | 5e+0 | At3g01860 | unknown protein | O.I. | H.G. | S.X. | |
| 0.20 | 14.2 | Zm.677.1.A1_at | At4g33360 | diphosphonucleotide phosphatase 2 | - | 2e-7 | At3g14890 | phosphoesterase | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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