| Gene ID | Contig5907_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g06960: OBF5 (OCS-ELEMENT BINDING FACTOR 5) (HF=3e-9) |
| Module size | 6 genes |
| NF | 0.39 |
| %ile | 53.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 84.7 | 0.77 | Contig5907_at | Contig5907 | - | - | 3e-9 | At5g06960 | OBF5 (OCS-ELEMENT BINDING FACTOR 5) | O.I. | H.G. | S.X. | |
| 0.46 | 61.0 | 0.79 | HVSMEi0013F11r2_at | HVSMEi0013F11r2 | - | - | 2e+0 | At3g44310 | NIT1 | O.I. | H.G. | S.X. | |
| 0.43 | 56.4 | 0.73 | Contig9001_at | Contig9001 | - | - | 3e-3 | At4g08810 | SUB1 | O.I. | H.G. | S.X. | |
| 0.43 | 56.4 | 0.73 | Contig9000_at | Contig9000 | - | - | 9e+0 | At2g21320 | zinc finger (B-box type) family protein | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.77 | Contig4994_at | Contig4994 | - | - | 4e-1 | At2g16060 | AHB1 (ARABIDOPSIS HEMOGLOBIN 1) | O.I. | H.G. | S.X. | |
| 0.20 | 21.1 | 0.73 | HV_CEa0006I19r2_at | HV_CEa0006I19r2 | - | - | 2e-1 | At3g60961 | ATP binding / nucleobase, nucleoside, nucleotide kinase | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 18.7 | 99.7 | GSM282040 | Malting_kilned_Morex_rep2 | GSE11200 | Expression data from malting barley seeds | |
| 16.6 | 99.6 | GSM282038 | Malting_kilned_Morex_rep1 | GSE11200 | Expression data from malting barley seeds | |
| 6.1 | 98.0 | GSM282029 | Malting_day1_Merit_rep3 | GSE11200 | Expression data from malting barley seeds | |
| 5.0 | 97.2 | GSM146375 | Maythorpe shoot Control, biological rep1 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.9 | 97.1 | GSM146380 | Maythorpe shoot Salt, biological rep 3 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.4 | 96.6 | GSM282026 | Malting_day1_Legacy_rep4 | GSE11200 | Expression data from malting barley seeds | |
| 4.3 | 96.4 | GSM146369 | Golden Promise shoot Control, biological rep1 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 4.2 | 96.3 | GSM419983 | Seed_Rep3 | GSE16754 | Comparative transcriptional profiling of organs of the barley spike | |
| 4.2 | 96.3 | GSM440977 | Control seed_Rep3 | GSE17669 | Gene expression in the barley spike during drought stress | |
| 4.2 | 96.3 | GSM282028 | Malting_day1_Merit_rep1 | GSE11200 | Expression data from malting barley seeds | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.64 | 83.4 | Os03g0318600 | At5g06960 | - | Transcription factor HBP-1b(c38) | 4e-15 | At5g06950 | AHBP-1B | O.I. | H.G. | S.X. | |
| 0.82 | 95.0 | Os06g0714200 | At5g06960 | - | Calcium/calmodulin-dependent protein kinasehomolog|CaM kinase homolog|MCK1 protein | 8e-19 | At2g46700 | calcium-dependent protein kinase, putative / CDPK, putative | O.I. | H.G. | S.X. | |
| 0.71 | 89.6 | Os01g0780500 | At5g06960 | - | SCAMP family protein | 1e-14 | At2g20840 | secretory carrier membrane protein (SCAMP) family protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os07g0592200 | At5g06960 | - | Peptidase A1, pepsin family protein | 2e-11 | At5g43100 | aspartyl protease family protein | O.I. | H.G. | S.X. | |
| 0.63 | 82.7 | Os09g0281700 | At5g06960 | - | Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1) | 1e-17 | At5g47960 | ATRABA4C | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | Os04g0517400 | At5g06960 | - | Conserved hypothetical protein | 5e-15 | At5g18480 | PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os01g0338200 | At5g06960 | - | Mov34/MPN/PAD-1 family protein | 1e+0 | At4g16144 | - | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os06g0188000 | At5g06960 | - | Cyclic nucleotide-gated channel C (Fragment) | 1e-11 | At4g30360 | ATCNGC17 | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | Os02g0822400 | At5g06960 | - | No apical meristem (NAM) protein domain containingprotein | 5e-3 | At5g09330 | anac082 (Arabidopsis NAC domain containing protein 82) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os01g0141100 | At5g06960 | - | ATPase of the AAA+ class | 4e-52 | At2g27600 | SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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