Co-expression analysis

Gene ID Contig5710_at
Gene name
Homology with ArabidopsisSimilar to At4g36910: LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) (HF=6e-7)
Module size 6 genes
NF 0.59
%ile 81.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.94Contig5710_atContig5710--6e-7At4g36910LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2)O.I.H.G.S.X.
0.6784.70.94Contig15782_atContig15782--1e+0At2g42760unknown proteinO.I.H.G.S.X.
0.6178.70.94Contig9319_atContig9319--3e-3At3g66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.6077.30.95Contig8797_atContig8797--1e-2At4g09080TOC75-IVO.I.H.G.S.X.
0.4661.00.94HA03M05u_s_atHA03M05u--2e-7At3g20390endoribonuclease L-PSP family proteinO.I.H.G.S.X.
0.4661.00.95Contig11880_atContig11880--2e+0At2g03110RNA binding / nucleic acid bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.099.7GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
16.499.6GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.097.2GSM160744drought control rep2GSE6990Barley drought stressLink to GEO
4.997.1GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
4.696.8GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
4.296.3GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.995.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
3.494.8GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.394.6GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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