Co-expression analysis

Gene ID Contig5709_at
Gene name
Homology with ArabidopsisSimilar to At2g30200: [acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase (HF=3e-56)
Module size 6 genes
NF 0.48
%ile 66.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.95Contig5709_atContig5709--3e-56At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseO.I.H.G.S.X.
0.6077.30.96Contig4090_s_atContig4090triticain beta 2-4e-7At5g43060cysteine proteinase, putative / thiol protease, putativeO.I.H.G.S.X.
0.4458.90.95Contig11015_atContig11015--1e-29At4g14147ARPC4O.I.H.G.S.X.
0.4458.90.96Contig8129_atContig8129--5e-1At1g23145RALFL2 (RALF-LIKE 2)O.I.H.G.S.X.
0.2935.50.96Contig4091_atContig4091--3e-13At1g47128RD21 (responsive to dehydration 21)O.I.H.G.S.X.
0.2732.10.95Contig18916_atContig18916--9e-1At5g09995unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.7GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
7.998.7GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
7.998.7GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.397.4GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM161220cold treatment rep2GSE6993Barley low temperature stressLink to GEO
4.796.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.196.2GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.196.2GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
4.096.0GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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