Co-expression analysis

Gene ID Contig5574_at
Gene name
Homology with ArabidopsisSimilar to At4g30210: ATR2 (ARABIDOPSIS P450 REDUCTASE 2) (HF=2e-11)
Module size 6 genes
NF 0.80
%ile 96.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.97Contig5574_atContig5574--2e-11At4g30210ATR2 (ARABIDOPSIS P450 REDUCTASE 2)O.I.H.G.S.X.
0.9198.10.97Contig5242_atContig5242--3e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.8394.00.97HA28J12r_s_atHA28J12r--1e+0At3g23255unknown proteinO.I.H.G.S.X.
0.7388.70.97Contig8436_s_atContig8436--7e-2At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)O.I.H.G.S.X.
0.6784.70.97Contig4494_s_atContig4494--5e+0At5g55508unknown proteinO.I.H.G.S.X.
0.5975.80.97Contig3963_s_atContig3963--7e-39At4g19210ATRLI2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.799.5GSM372970genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
14.299.5GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
11.299.2GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
7.798.6GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
7.698.6GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
7.698.6GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.698.2GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
6.698.2GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.298.0GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.997.9GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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