Co-expression analysis

Gene ID Contig5482_at
Gene name
Homology with ArabidopsisSimilar to At4g28750: PSAE-1 (PSA E1 KNOCKOUT) (HF=1e+0)
Module size 7 genes
NF 0.61
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.96Contig5482_atContig5482--1e+0At4g28750PSAE-1 (PSA E1 KNOCKOUT)O.I.H.G.S.X.
0.7187.10.95rbah31f14_s_atrbah31f14--1e+0At1g75380wound-responsive protein-relatedO.I.H.G.S.X.
0.6784.70.95HVSMEn0020J21r2_s_atHVSMEn0020J21r2--7e+0At1g16225-O.I.H.G.S.X.
0.6178.70.95Contig8371_atContig8371--1e-8At1g06550enoyl-CoA hydratase/isomerase family proteinO.I.H.G.S.X.
0.4661.00.95Contig15133_atContig15133--1e+0At2g22345-O.I.H.G.S.X.
0.4458.90.95Contig7989_atContig7989--4e+0At4g29020glycine-rich proteinO.I.H.G.S.X.
0.4458.90.95Contig7885_atContig7885--2e-16At1g66330senescence-associated family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.2GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.995.8GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.795.5GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.695.3GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.494.8GSM261052Bonus Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.294.3GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.294.3GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM160744drought control rep2GSE6990Barley drought stressLink to GEO
3.194.1GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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