Co-expression analysis

Gene ID Contig5368_at
Gene name
Homology with ArabidopsisSimilar to At3g46150: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.47
%ile 65.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.90.95Contig5368_atContig5368--2e+0At3g46150unknown proteinO.I.H.G.S.X.
0.6784.70.97Contig13783_atContig13783--4e-1At2g41225unknown proteinO.I.H.G.S.X.
0.5369.70.96Contig6826_s_atContig6826--8e-1At2g15535LCR10 (Low-molecular-weight cysteine-rich 10)O.I.H.G.S.X.
0.5066.90.96Contig13988_atContig13988--5e-4At4g24020NLP7 (NIN LIKE PROTEIN 7)O.I.H.G.S.X.
0.3747.90.96Contig12434_atContig12434--2e-6At4g30930NFD1 (NUCLEAR FUSION DEFECTIVE 1)O.I.H.G.S.X.
0.3647.10.96Contig6981_atContig6981--4e-5At4g00170vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.8GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
8.298.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.498.1GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.397.4GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.296.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.895.7GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.695.3GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM130800control, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.595.1GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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