| Gene ID | Contig5297_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g64550: ATGCN3 (HF=4e-16) |
| Module size | 6 genes |
| NF | 0.80 |
| %ile | 96.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 88.7 | 0.97 | Contig5297_at | Contig5297 | - | - | 4e-16 | At1g64550 | ATGCN3 | O.I. | H.G. | S.X. | |
| 0.91 | 98.1 | 0.97 | Contig4175_at | Contig4175 | - | - | 1e-19 | At3g07100 | protein transport protein Sec24, putative | O.I. | H.G. | S.X. | |
| 0.80 | 92.5 | 0.97 | Contig4760_s_at | Contig4760 | - | - | 1e+0 | At4g38700 | disease resistance-responsive family protein | O.I. | H.G. | S.X. | |
| 0.71 | 87.1 | 0.97 | Contig11464_at | Contig11464 | - | - | 6e-20 | At1g55740 | AtSIP1 (Arabidopsis thaliana seed imbibition 1) | O.I. | H.G. | S.X. | |
| 0.67 | 84.7 | 0.97 | Contig5117_at | Contig5117 | - | - | 8e-2 | At5g60500 | undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein | O.I. | H.G. | S.X. | |
| 0.61 | 78.7 | 0.97 | Contig6995_at | Contig6995 | - | - | 2e-8 | At5g57270 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.2 | 98.5 | GSM238435 | Embryo 24 h; Seed germination; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 6.9 | 98.3 | GSM238434 | Embryo 24 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.2 | 97.4 | GSM238436 | Embryo 48 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.3 | 96.4 | GSM282032 | Malting_day1_Morex_rep1 | GSE11200 | Expression data from malting barley seeds | |
| 4.2 | 96.3 | GSM213441 | Barley seeds control in Hoagland solution for 12hr | GSE8618 | P. aeruginosa virulent factor to barley | |
| 4.2 | 96.3 | GSM238428 | Embryo 16DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.2 | 96.3 | GSM238432 | Embryo 0 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.0 | 96.0 | GSM238415 | Endosperm 8DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.9 | 95.8 | GSM282037 | Malting_day1_Morex_rep2 | GSE11200 | Expression data from malting barley seeds | |
| 3.8 | 95.7 | GSM238412 | Endosperm 4DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.53 | 71.3 | Os02g0826500 | At1g64550 | - | ATPase components of ABC transporters withduplicated ATPase domains | 1e-45 | At1g64550 | ATGCN3 | O.I. | H.G. | S.X. | |
| 0.74 | 91.4 | Os03g0801600 | At1g64550 | - | Vacuolar protein sorting-associated protein 35family protein | 2e-37 | At1g75850 | VPS35B (VPS35 HOMOLOG B) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os08g0318500 | At1g64550 | - | Sec8 exocyst complex component specific domaincontaining protein | 4e-1 | At3g10380 | SEC8 (SUBUNIT OF EXOCYST COMPLEX 8) | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os04g0678800 | At1g64550 | - | - | 2e-24 | At3g52850 | VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os07g0657200 | At1g64550 | - | WD40-like domain containing protein | 3e-8 | At3g63460 | WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os04g0653400 | At1g64550 | - | Flavodoxin-like domain containing protein | 1e-12 | At4g30210 | ATR2 (ARABIDOPSIS P450 REDUCTASE 2) | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os02g0469200 | At1g64550 | - | Conserved hypothetical protein | 7e-6 | At5g58100 | unknown protein | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os08g0323000 | At1g64550 | - | Conserved hypothetical protein | 5e-5 | At5g61970 | signal recognition particle-related / SRP-related | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os04g0129500 | At1g64550 | - | Sec23/Sec24 zinc finger domain containing protein | 7e-31 | At3g07100 | protein transport protein Sec24, putative | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os04g0118400 | At1g64550 | - | Elongation factor EF-2 (Fragment) | 0 | At1g56070 | LOS1 | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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