Co-expression analysis

Gene ID Contig5016_at
Gene name
Homology with ArabidopsisSimilar to At2g47060: serine/threonine protein kinase, putative (HF=1e-30)
Module size 7 genes
NF 0.41
%ile 56.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.91Contig5016_atContig5016--1e-30At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4458.90.93Contig5010_s_atContig5010--3e-20At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.4458.90.96HZ54E21r_s_atHZ54E21r--6e-17At3g46010ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)O.I.H.G.S.X.
0.4053.10.93Contig13573_atContig13573--4e+0At4g31441unknown proteinO.I.H.G.S.X.
0.4053.10.94Contig10557_s_atContig10557--8e-5At5g20380PHT4O.I.H.G.S.X.
0.2326.10.92HV02E02u_atHV02E02u--1e+0At1g65170ubiquitin carboxyl-terminal hydrolase family proteinO.I.H.G.S.X.
0.2122.60.92Contig16392_atContig16392--6e-1At1g27710glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.399.0GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
8.398.8GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
7.498.5GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.098.4GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.498.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
6.498.1GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.198.0GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.997.9GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.597.6GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
4.796.9GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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