Co-expression analysis

Gene ID Contig4879_at
Gene name
Homology with ArabidopsisSimilar to At3g03070: NADH-ubiquinone oxidoreductase-related (HF=6e-21)
Module size 6 genes
NF 0.15
%ile 18.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.95Contig4879_atContig4879--6e-21At3g03070NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.2326.10.96HY08N07u_s_atHY08N07u--4e+0At3g28870-O.I.H.G.S.X.
0.2122.60.95Contig15019_atContig15019--3e-11At3g09320zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.1818.20.95Contig15242_atContig15242--1e+0At3g60540sec61beta family proteinO.I.H.G.S.X.
0.1311.60.95HA03B13u_s_atHA03B13u--8e-4At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.
0.064.80.95Contig704_x_atContig704--1e-1At1g15140oxidoreductase NAD-binding domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.7GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
7.898.6GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.198.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
5.297.4GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.197.3GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.595.1GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
3.194.1GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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