Co-expression analysis

Gene ID Contig4816_x_at
Gene name
Homology with ArabidopsisSimilar to At1g70700: TIFY7 (HF=5e+0)
Module size 6 genes
NF 0.75
%ile 94.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.91Contig4816_x_atContig4816--5e+0At1g70700TIFY7O.I.H.G.S.X.
0.7790.80.88Contig4816_atContig4816--5e+0At1g70700TIFY7O.I.H.G.S.X.
0.7388.70.88Contig4817_atContig4817--2e-56At2g01140fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.7187.10.85Contig4815_atContig4815--1e+0At5g24318catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.
0.6077.30.88Contig22458_atContig22458--8e-6At2g31560unknown proteinO.I.H.G.S.X.
0.5066.90.91Contig7032_atContig7032--1e-7At5g64570XYL4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
51.199.9GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
25.699.8GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
25.499.8GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
22.599.8GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
20.099.7GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
8.798.9GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
7.098.4GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
6.698.2GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.797.7GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.196.2GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.psZS007xM09f_s_at, orthologous to the query gene, Contig4816_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6PsAffx.psZS007xM09f_s_atAt1g70700--5e+0At5g46730glycine-rich proteinO.I.H.G.S.X.
0.013.4GmaAffx.90221.1.S1_atAt1g70700--3e-1At5g50660unknown proteinO.I.H.G.S.X.
0.013.4PsAffx.psZG005xN22f_s_atAt1g70700--9e+0At5g14602unknown proteinO.I.H.G.S.X.
0.001.4PsAffx.C86000041_atAt1g70700--2e-1At1g31330PSAF (photosystem I subunit F)O.I.H.G.S.X.
0.001.4Gma.547.1.S1_atAt1g70700--2e+0At5g07190ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)O.I.H.G.S.X.
0.001.4Gma.2534.2.S1_s_atAt1g70700--2e-76At4g02890UBQ14O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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