Co-expression analysis

Gene ID Contig4810_at
Gene name
Homology with ArabidopsisSimilar to At4g00750: dehydration-responsive family protein (HF=2e-2)
Module size 6 genes
NF 0.11
%ile 13.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.30.88Contig4810_atContig4810--2e-2At4g00750dehydration-responsive family proteinO.I.H.G.S.X.
0.7790.80.82Contig4811_atContig4811--5e-3At2g45750dehydration-responsive family proteinO.I.H.G.S.X.
0.4661.00.88Contig2858_s_atContig2858--1e-3At1g66680AR401O.I.H.G.S.X.
0.3849.50.86Contig1237_s_atContig1237aquaporin-1e-30At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.H.G.S.X.
0.086.50.90Contig3050_atContig3050--2e-3At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.032.60.87Contig6730_atContig6730--1e+0At3g10815zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.7GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.596.7GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.196.2GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
3.294.3GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.194.1GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.14867.1.A1_at, orthologous to the query gene, Contig4810_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.14867.1.A1_atAt4g00750--2e-9At4g00750dehydration-responsive family proteinO.I.H.G.S.X.
0.8094.0Zm.14867.2.A1_atAt4g00750cyclic nucleotide-gated ion channel 14-1e-6At5g57940ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)O.I.H.G.S.X.
0.7792.1Zm.3568.2.A1_atAt4g00750--2e+0At5g50760auxin-responsive family proteinO.I.H.G.S.X.
0.4759.9Zm.6713.1.A1_atAt4g00750ATP-citrate synthase-1e-36At1g09430ACLA-3O.I.H.G.S.X.
0.2622.7Zm.10199.1.A1_atAt4g00750hypothetical protein LOC100193850-2e-5At1g06890transporter-relatedO.I.H.G.S.X.
0.2318.6Zm.17363.1.S1_atAt4g00750--2e-2At1g72080unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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