Co-expression analysis

Gene ID Contig4809_at
Gene name
Homology with ArabidopsisSimilar to At1g64370: unknown protein (HF=9e-2)
Module size 6 genes
NF 0.60
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.89Contig4809_atContig4809--9e-2At1g64370unknown proteinO.I.H.G.S.X.
0.6784.70.89Contig3301_s_atContig3301--7e-1At1g08660glycosyl transferase family 29 protein / sialyltransferase family proteinO.I.H.G.S.X.
0.6784.70.91HF11O19r_atHF11O19r--8e-5At3g25140QUA1 (QUASIMODO 1)O.I.H.G.S.X.
0.5774.90.90Contig18125_atContig18125--2e-6At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.4661.00.90Contig2878_atContig2878--4e-1At3g496302-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.
0.4053.10.89Contig17801_atContig17801--1e+0At4g36620zinc finger (GATA type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.698.2GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.997.9GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.596.7GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM372973genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM372972genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM372952genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.6532.4.S1_a_at, orthologous to the query gene, Contig4809_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5674.4Zm.6532.4.S1_a_atAt1g64370dehydrin 13-9e-2At1g20440COR47 (COLD-REGULATED 47)O.I.H.G.S.X.
0.6179.5Zm.14476.2.A1_atAt1g64370Protein disulfide isomerase-1e-5At3g54960ATPDIL1-3 (PDI-LIKE 1-3)O.I.H.G.S.X.
0.6077.8Zm.791.1.S1_s_atAt1g64370hypothetical protein LOC100280140-3e+0At4g1672060S ribosomal protein L15 (RPL15A)O.I.H.G.S.X.
0.6077.8Zm.5313.2.A1_atAt1g6437060S ribosomal protein L12-9e-9At2g3719060S ribosomal protein L12 (RPL12A)O.I.H.G.S.X.
0.5065.7Zm.19357.1.A1_atAt1g64370pre-mRNA cleavage complex II protein Clp1-2e+0At2g38465unknown proteinO.I.H.G.S.X.
0.4048.5Zm.13679.1.A1_atAt1g64370chemocyanin-9e-5At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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