Co-expression analysis

Gene ID Contig4809_at
Gene name
Homology with ArabidopsisSimilar to At1g64370: unknown protein (HF=9e-2)
Module size 6 genes
NF 0.60
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.89Contig4809_atContig4809--9e-2At1g64370unknown proteinO.I.H.G.S.X.
0.6784.70.89Contig3301_s_atContig3301--7e-1At1g08660glycosyl transferase family 29 protein / sialyltransferase family proteinO.I.H.G.S.X.
0.6784.70.91HF11O19r_atHF11O19r--8e-5At3g25140QUA1 (QUASIMODO 1)O.I.H.G.S.X.
0.5774.90.90Contig18125_atContig18125--2e-6At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.4661.00.90Contig2878_atContig2878--4e-1At3g496302-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.
0.4053.10.89Contig17801_atContig17801--1e+0At4g36620zinc finger (GATA type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.698.2GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.997.9GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.596.7GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM372973genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM372972genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM372952genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os03g0655400, orthologous to the query gene, Contig4809_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7189.6Os03g0655400At1g64370-CAS15 (Cold acclimation responsive proteinBudCAR4) (Cold acclimation responsive protein BudCAR6)5e-3At1g54410dehydrin family proteinO.I.H.G.S.X.
0.4051.1Os01g0550300At1g64370-Conserved hypothetical protein2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.3745.0Os01g0505400At1g64370-Pyruvate decarboxylase family protein2e-10At5g17380pyruvate decarboxylase family proteinO.I.H.G.S.X.
0.3338.8Os04g0533300At1g64370-Remorin (pp34)5e-4At5g23750remorin family proteinO.I.H.G.S.X.
0.3032.7Os03g0826600At1g64370-Phosphoesterase family protein8e-11At1g07230hydrolase, acting on ester bondsO.I.H.G.S.X.
0.2727.5Os05g0119300At1g64370-Molluscan rhodopsin C-terminal tail family protein5e-3At5g45350proline-rich family proteinO.I.H.G.S.X.
0.1813.7Os03g0324300At1g64370-EIL39e-2At5g21120EIL2 (ETHYLENE-INSENSITIVE3-LIKE 2)O.I.H.G.S.X.
0.1510.3Os07g0186000At1g64370-Thioredoxin H-type (TRX-H) (Phloem sap 13 kDaprotein-1)2e+0At3g22530unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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