Co-expression analysis

Gene ID Contig4786_at
Gene name
Homology with ArabidopsisSimilar to At5g50690: AtHSD7 (hydroxysteroid dehydrogenase 7) (HF=4e-5)
Module size 13 genes
NF 0.77
%ile 95.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.30.80Contig4786_atContig4786--4e-5At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)O.I.H.G.S.X.
0.9298.40.87Contig25193_atContig25193--1e+0Atmg00450-O.I.H.G.S.X.
0.8895.20.87HT05D14u_s_atHT05D14u--2e+0At3g21710unknown proteinO.I.H.G.S.X.
0.8594.50.87Contig5436_atContig5436--6e-1At1g44820aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeO.I.H.G.S.X.
0.8594.50.88Contig4497_atContig4497--1e-2At1g12410CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)O.I.H.G.S.X.
0.8192.80.88Contig8622_atContig8622--9e-1At2g40085unknown proteinO.I.H.G.S.X.
0.8092.50.91Contig4495_atContig4495--1e+0At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)O.I.H.G.S.X.
0.7991.40.90Contig4499_s_atContig4499--4e-18At4g22670AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)O.I.H.G.S.X.
0.7287.40.91Contig9656_atContig9656--1e+0At2g41225unknown proteinO.I.H.G.S.X.
0.7187.10.89Contig4498_atContig4498--2e-1At1g28290AGP31 (arabinogalactan-protein 31)O.I.H.G.S.X.
0.6784.70.89HT07E22u_x_atHT07E22u--9e-1At4g12850far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.
0.6380.30.88HVSMEl0023K24r2_atHVSMEl0023K24r2--4e+0At4g09647-O.I.H.G.S.X.
0.5369.70.88Contig4495_x_atContig4495--1e+0At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.499.6GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
15.599.6GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
15.099.5GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
13.199.4GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
11.399.3GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
11.099.2GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
10.499.2GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
9.699.0GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
9.098.9GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.598.2GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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