Co-expression analysis

Gene ID	Contig4769_at
Gene name
Homology with Arabidopsis	Similar to At2g32520: dienelactone hydrolase family protein (HF=3e-5)
Module size	6 genes
NF	0.18
%ile	21.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	74.9	0.93	Contig4769_at	Contig4769	-	-	3e-5	At2g32520	dienelactone hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.93	HU05K13u_s_at	HU05K13u	-	-	3e-1	At2g34560	katanin, putative	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.94	EBem06_SQ003_J07_at	EBem06_SQ003_J07	-	-	3e+0	At2g42530	COR15B (COLD REGULATED 15B)	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.94	Contig3170_at	Contig3170	-	-	4e-45	At1g07410	ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.94	HW09F23V_s_at	HW09F23V	-	-	3e+0	At4g10240	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.93	Contig2764_s_at	Contig2764	-	-	3e-9	At5g54190	PORA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.4	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.0	97.2	GSM238429	Embryo 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.6	96.8	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.6	96.8	GSM282028	Malting_day1_Merit_rep1	GSE11200	Expression data from malting barley seeds
4.4	96.6	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.7	95.5	GSM373001	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.6	95.3	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM282023	Malting_day4_Merit_rep3	GSE11200	Expression data from malting barley seeds
3.2	94.3	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
3.1	94.1	GSM282022	Malting_day4_Merit_rep4	GSE11200	Expression data from malting barley seeds

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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