Co-expression analysis

Gene ID Contig4737_s_at
Gene name
Homology with ArabidopsisSimilar to At2g35040: AICARFT/IMPCHase bienzyme family protein (HF=3e-29)
Module size 7 genes
NF 0.55
%ile 76.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.97Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinO.I.H.G.S.X.
0.6178.70.96Contig10954_atContig10954--4e+0At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.
0.6077.30.96Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinO.I.H.G.S.X.
0.5066.90.96Contig14154_atContig14154--2e+0At1g60320Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.5066.90.97Contig9632_atContig9632--1e-1At1g78370ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)O.I.H.G.S.X.
0.4863.20.96Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.3849.50.96Contig4763_atContig4763--3e-7At4g39960DNAJ heat shock family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.197.3GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
3.595.1GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.494.8GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
3.394.6GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
2.993.4GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.893.1GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.792.7GSM261055Bonus Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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