Co-expression analysis

Gene ID Contig4715_at
Gene name
Homology with ArabidopsisSimilar to At4g10810: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.43
%ile 59.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.96Contig4715_atContig4715--1e+0At4g10810unknown proteinO.I.H.G.S.X.
0.6178.70.96Contig15165_s_atContig15165--2e+0At3g28460unknown proteinO.I.H.G.S.X.
0.3647.10.96Contig11372_atContig11372--5e-7At3g27100-O.I.H.G.S.X.
0.3037.00.96Contig10684_atContig10684--8e-17At1g31780-O.I.H.G.S.X.
0.2935.50.96Contig8943_atContig8943--1e-6At1g7599026S proteasome regulatory subunit S3, putative (RPN3)O.I.H.G.S.X.
0.2732.10.96Contig10954_atContig10954--4e+0At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.1GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
3.494.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.394.6GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.194.1GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
3.093.8GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
2.993.4GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
2.692.3GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
2.591.9GSM689008 h salt stressed replicate 3GSE3097Barley1 salinity stress studyLink to GEO
2.591.9GSM160464drought control rep1GSE6990Barley drought stressLink to GEO
2.591.9GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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