| Gene ID | Contig4647_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g37990: ribosome biogenesis regulatory protein (RRS1) family protein (HF=3e-3) |
| Module size | 6 genes |
| NF | 0.55 |
| %ile | 76.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 66.9 | 0.96 | Contig4647_at | Contig4647 | - | - | 3e-3 | At2g37990 | ribosome biogenesis regulatory protein (RRS1) family protein | O.I. | H.G. | S.X. | |
| 0.67 | 84.7 | 0.96 | Contig6066_at | Contig6066 | - | - | 4e+0 | At5g23640 | unknown protein | O.I. | H.G. | S.X. | |
| 0.57 | 74.9 | 0.96 | Contig8299_at | Contig8299 | - | - | 3e-9 | At3g20650 | mRNA capping enzyme family protein | O.I. | H.G. | S.X. | |
| 0.46 | 61.0 | 0.96 | Contig4172_at | Contig4172 | - | - | 2e-2 | At3g52090 | NRPB11 | O.I. | H.G. | S.X. | |
| 0.44 | 58.9 | 0.97 | Contig15070_at | Contig15070 | - | - | 1e-2 | At4g10810 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 47.1 | 0.96 | Contig8629_at | Contig8629 | - | - | 3e-6 | At2g17190 | ubiquitin family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 24.9 | 99.8 | GSM238431 | Embryo 25DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 16.0 | 99.6 | GSM238430 | Embryo 25DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 8.9 | 98.9 | GSM238428 | Embryo 16DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 6.0 | 97.9 | GSM282029 | Malting_day1_Merit_rep3 | GSE11200 | Expression data from malting barley seeds | |
| 5.9 | 97.9 | GSM215728 | gibberellin treatment rep1 | GSE8712 | The effects of Yariv-reagent on barley aleurone GA signaling | |
| 5.8 | 97.8 | GSM282028 | Malting_day1_Merit_rep1 | GSE11200 | Expression data from malting barley seeds | |
| 5.2 | 97.4 | GSM238412 | Endosperm 4DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.0 | 97.2 | GSM372999 | genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2 | GSE14930 | Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene | |
| 4.3 | 96.4 | GSM215731 | gibberellin treatment rep2 | GSE8712 | The effects of Yariv-reagent on barley aleurone GA signaling | |
| 4.1 | 96.2 | GSM372963 | genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2 | GSE14930 | Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.75 | 91.9 | Os04g0685100 | At2g37990 | - | Ribosomal biogenesis regulatory protein familyprotein | 3e-6 | At2g37990 | ribosome biogenesis regulatory protein (RRS1) family protein | O.I. | H.G. | S.X. | |
| 0.58 | 77.0 | Os07g0600400 | At2g37990 | - | WD40-like domain containing protein | 9e-7 | At5g15550 | transducin family protein / WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os05g0144200 | At2g37990 | - | Orn/Lys/Arg decarboxylase, C-terminal domaincontaining protein | 2e-1 | At5g26114 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os11g0266000 | At2g37990 | - | Hypothetical protein | 2e-1 | At3g42310 | unknown protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os08g0155000 | At2g37990 | - | Brix domain containing protein | 6e-4 | At1g63780 | IMP4 | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | Os04g0620700 | At2g37990 | - | RNA-binding region RNP-1 (RNA recognition motif)domain containing protein | 2e-2 | At4g10880 | unknown protein | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os09g0542000 | At2g37990 | - | DNA/RNA-binding protein Alba/DUF78 domaincontaining protein | 7e-16 | At1g76010 | nucleic acid binding | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | Os07g0475800 | At2g37990 | - | Eukaryotic rRNA processing family protein | 7e-7 | At3g22660 | rRNA processing protein-related | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os07g0170300 | At2g37990 | - | YT521-B-like protein family protein | 2e-18 | At3g13460 | ECT2 | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os02g0550700 | At2g37990 | - | Nucleolar autoantigen-like protein | 3e-6 | At3g60500 | CER7 (ECERIFERUM 7) | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os03g0586800 | At2g37990 | - | Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNAligase) (LysRS) | 2e-26 | At3g11710 | ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1) | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os01g0120800 | At2g37990 | - | Eukaryotic translation initiation factor 3 subunit10 (eIF-3 theta) (Eukaryotic translation initiationfactor 3 large subunit) (eIF3a) (p114) | 9e-18 | At4g11420 | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A) | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os03g0352300 | At2g37990 | - | Nucleolar protein | 2e-20 | At3g12860 | nucleolar protein Nop56, putative | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os05g0104800 | At2g37990 | - | Eukaryotic translation initiation factor 3 subunit5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f) | 6e-4 | At2g39990 | EIF2 | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os04g0683100 | At2g37990 | - | Pre-mRNA cleavage factor I 25 kDa subunit(Cleavage and polyadenylation specific factor 5, 25 kDsubunit) | 8e-65 | At4g25550 | protein binding | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os05g0552300 | At2g37990 | - | Guanine nucleotide-binding protein betasubunit-like protein (GPB-LR) (RWD) | 2e-19 | At1g18080 | ATARCA | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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