Co-expression analysis

Gene ID	Contig460_s_at
Gene name	sucrose synthase
Homology with Arabidopsis	Similar to At5g20830: SUS1 (SUCROSE SYNTHASE 1) (HF=6e-12)
Module size	6 genes
NF	0.55
%ile	76.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	0.93	Contig460_s_at	Contig460	sucrose synthase	-	6e-12	At5g20830	SUS1 (SUCROSE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.94	HVSMEl0024B05r2_at	HVSMEl0024B05r2	-	-	4e+0	At5g08480	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.95	Contig11890_at	Contig11890	-	-	4e-5	At4g21580	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.95	Contig16601_at	Contig16601	-	-	3e+0	At2g40070	-	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.94	Contig14009_s_at	Contig14009	-	-	2e+0	At4g37020	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.95	Contig8795_at	Contig8795	-	-	6e-1	At2g26500	cytochrome b6f complex subunit (petM), putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.8	GSM261042	before 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.2	98.5	GSM261044	before 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.0	98.4	GSM261075	Albina e-16 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.9	98.3	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
6.5	98.2	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
4.9	97.1	GSM261065	Xantha s-46 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.6	96.8	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.3	96.4	GSM372962	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.6	95.3	GSM261033	Dicktoo-chilling-rep1	GSE10329	Low temperature stress in cv. Dicktoo
3.6	95.3	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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