Co-expression analysis

Gene ID Contig4590_at
Gene name
Homology with ArabidopsisSimilar to At2g18740: small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative (HF=6e+0)
Module size 6 genes
NF 0.42
%ile 58.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.92Contig4590_atContig4590--6e+0At2g18740small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putativeO.I.H.G.S.X.
0.7187.10.90baal21h16_s_atbaal21h16--4e-6At4g38230CPK26O.I.H.G.S.X.
0.4458.90.92Contig14715_atContig14715--2e-1At1g68730zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.2935.50.93HVSMEf0001F23r2_x_atHVSMEf0001F23r2--9e+0At4g26030transcription factorO.I.H.G.S.X.
0.2122.60.93Contig3801_atContig3801--4e-26At1g69840band 7 family proteinO.I.H.G.S.X.
0.2021.10.93Contig10402_atContig10402--2e-1At3g54780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.9GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.897.8GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
5.697.7GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.297.4GSM363460Control (C) - rep1GSE14521Late response to boron toxicity in barley leavesLink to GEO
5.197.3GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.097.2GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.097.2GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.897.0GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.396.4GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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