Co-expression analysis

Gene ID	Contig44_s_at
Gene name
Homology with Arabidopsis	Similar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=3e-23)
Module size	7 genes
NF	0.37
%ile	50.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.7	0.96	Contig44_s_at	Contig44	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.97	Contig17683_at	Contig17683	-	-	2e+0	At3g11730	ATFP8	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig7686_at	Contig7686	-	-	2e-1	At1g60650	glycine-rich RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.42	55.2	0.96	rbags16m05_s_at	rbags16m05	-	-	7e-1	At2g21150	XCT (XAP5 CIRCADIAN TIMEKEEPER)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	HU09F16u_s_at	HU09F16u	-	-	8e-1	At2g30980	ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta)	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.97	Contig5894_s_at	Contig5894	-	-	3e-1	At5g33300	chromosome-associated kinesin-related	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.96	Contig5619_at	Contig5619	-	-	3e-3	At1g06690	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	99.1	GSM431571	pathogen isolates: Polymyxa betae - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.0	98.4	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
6.2	98.0	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.2	97.4	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.1	97.3	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.1	96.2	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.6	95.3	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.6	95.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
3.5	95.1	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.2	94.3	GSM130800	control, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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