Co-expression analysis

Gene ID Contig4442_at
Gene name
Homology with ArabidopsisSimilar to At4g05030: heavy-metal-associated domain-containing protein (HF=2e+0)
Module size 6 genes
NF 0.67
%ile 88.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.97Contig4442_atContig4442--2e+0At4g05030heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6784.70.98Contig3172_atContig3172--3e-9At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.6380.30.97Contig20805_atContig20805--6e-1At1g47300F-box family proteinO.I.H.G.S.X.
0.5369.70.97Contig4017_atContig4017--1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)O.I.H.G.S.X.
0.5066.90.98Contig22054_atContig22054--8e-2At2g02440unknown proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.1GSM160744drought control rep2GSE6990Barley drought stressLink to GEO
2.893.1GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
2.893.1GSM688978 h control replicate 3GSE3097Barley1 salinity stress studyLink to GEO
2.893.1GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
2.792.7GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
2.591.9GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
2.591.9GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
2.491.4GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.491.4GSM688943 h salt stressed replicate 3GSE3097Barley1 salinity stress studyLink to GEO
2.390.9GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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