Co-expression analysis

Gene ID Contig4366_at
Gene name
Homology with ArabidopsisSimilar to At5g49810: MMT (HF=5e-16)
Module size 6 genes
NF 0.73
%ile 93.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.96Contig4366_atContig4366--5e-16At5g49810MMTO.I.H.G.S.X.
0.6784.70.96Contig25764_atContig25764--2e-6At5g19160unknown proteinO.I.H.G.S.X.
0.6784.70.97Contig2575_s_atContig2575--2e-1At4g27540PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)O.I.H.G.S.X.
0.6077.30.96Contig8678_s_atContig8678--3e-17At1g31230AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I)O.I.H.G.S.X.
0.6077.30.96Contig4660_s_atContig4660--2e-14At1g61700DNA-directed RNA polymerase II, putative (RPB10)O.I.H.G.S.X.
0.5572.00.96Contig3100_atContig3100--1e-5At4g16830nuclear RNA-binding protein (RGGA)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.999.7GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
14.299.5GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
13.999.5GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.695.3GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
3.595.1GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.595.1GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.494.8GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.494.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM160464drought control rep1GSE6990Barley drought stressLink to GEO
3.093.8GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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