Co-expression analysis

Gene ID Contig4324_s_at
Gene name
Homology with ArabidopsisSimilar to At4g26060: unknown protein (HF=8e+0)
Module size 9 genes
NF 0.68
%ile 90.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.83Contig4324_s_atContig4324--8e+0At4g26060unknown proteinO.I.H.G.S.X.
0.8494.30.89Contig10453_atContig10453--9e-1At5g19485transferaseO.I.H.G.S.X.
0.7589.50.89Contig5969_atContig5969--7e-4At1g64970G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)O.I.H.G.S.X.
0.6784.70.90Contig4324_atContig4324--8e+0At4g26060unknown proteinO.I.H.G.S.X.
0.6784.70.90Contig11946_atContig11946--2e+0At1g49950DNA-binding protein, putativeO.I.H.G.S.X.
0.6784.70.92Contig13318_atContig13318--1e-2At3g59010pectinesterase family proteinO.I.H.G.S.X.
0.6380.30.89Contig5966_atContig5966--9e-2At4g33360terpene cyclase/mutase-relatedO.I.H.G.S.X.
0.5369.70.89Contig5809_atContig5809--2e-14At1g58440XF1O.I.H.G.S.X.
0.4863.20.89Contig5490_atContig5490--3e-1At3g14680CYP72A14O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.297.4GSM688893 h control replicate 1GSE3097Barley1 salinity stress studyLink to GEO
4.796.9GSM261026ABA-Early-rep3GSE10328ABA experimentLink to GEO
4.396.4GSM261023ABA-Control-rep3GSE10328ABA experimentLink to GEO
4.196.2GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.196.2GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.096.0GSM6890527 h salt stressed replicate 2GSE3097Barley1 salinity stress studyLink to GEO
4.096.0GSM688988 h salt stressed replicate 1GSE3097Barley1 salinity stress studyLink to GEO
3.995.8GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.795.5GSM146372Golden Promise shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.795.5GSM688913 h control replicate 3GSE3097Barley1 salinity stress studyLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.CL72Contig2_at, orthologous to the query gene, Contig4324_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5071.7PsAffx.CL72Contig2_atAt4g26060--3e-1At2g25190unknown proteinO.I.H.G.S.X.
0.9198.6PsAffx.CL221Contig1_atAt4g26060--2e+0At5g24460unknown proteinO.I.H.G.S.X.
0.7790.3PsAffx.CL136Contig1_atAt4g26060--2e+0At1g28580GDSL-motif lipase, putativeO.I.H.G.S.X.
0.7388.9PsAffx.CL111Contig1_atAt4g26060--9e+0At3g02000ROXY1O.I.H.G.S.X.
0.6080.7PsAffx.CL13Contig1_atAt4g26060--7e-2At5g4004060S acidic ribosomal protein P2 (RPP2E)O.I.H.G.S.X.
0.5778.8PsAffx.C65000037_s_atAt4g26060--9e-10At5g08680ATP synthase beta chain, mitochondrial, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage