Co-expression analysis

Gene ID Contig4305_s_at
Gene name
Homology with ArabidopsisSimilar to At5g06690: WCRKC1 (WCRKC THIOREDOXIN 1) (HF=5e+0)
Module size 6 genes
NF 0.60
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.91Contig4305_s_atContig4305--5e+0At5g06690WCRKC1 (WCRKC THIOREDOXIN 1)O.I.H.G.S.X.
0.8394.00.92Contig17881_atContig17881--4e-1At4g17580Bax inhibitor-1 family protein / BI-1 family proteinO.I.H.G.S.X.
0.7388.70.92HU06E17r_atHU06E17r--2e-3At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.7388.70.94HA05b17r_atHA05b17r--3e-13At1g09210calreticulin 2 (CRT2)O.I.H.G.S.X.
0.6178.70.92Contig11950_atContig11950--8e+0At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.3138.60.92Contig6521_atContig6521--4e+0At5g63480unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.699.6GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
15.099.5GSM311261kara_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
12.099.3GSM311259kara_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
7.998.7GSM311262kara_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
7.498.5GSM311260kara_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
7.498.5GSM311265kara_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
7.298.5GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.298.0GSM282023Malting_day4_Merit_rep3GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
4.897.0GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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