Co-expression analysis

Gene ID Contig4115_at
Gene name
Homology with ArabidopsisSimilar to At2g36895: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.50
%ile 70.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.90Contig4115_atContig4115--2e+0At2g36895unknown proteinO.I.H.G.S.X.
0.7790.80.87rbaal21j20_s_atrbaal21j20--8e+0At3g43432unknown proteinO.I.H.G.S.X.
0.6784.70.90bah24p14_atbah24p14--8e-2At4g09170unknown proteinO.I.H.G.S.X.
0.6784.70.92Contig4113_atContig4113--2e+0At4g29190zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.1412.90.87Contig9101_s_atContig9101--7e+0At5g23930mitochondrial transcription termination factor-related / mTERF-relatedO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.898.6GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.398.1GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
5.497.5GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
5.497.5GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.897.0GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.897.0GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.696.8GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
4.596.7GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
4.596.7GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
4.496.6GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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