Co-expression analysis

Gene ID Contig4017_s_at
Gene name
Homology with ArabidopsisSimilar to At2g16510: vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) (HF=1e+0)
Module size 6 genes
NF 0.52
%ile 72.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.98Contig4017_s_atContig4017--1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)O.I.H.G.S.X.
0.5369.70.97Contig20835_atContig20835--3e-1At5g614502-phosphoglycerate kinase-relatedO.I.H.G.S.X.
0.5066.90.97HA10A05u_s_atHA10A05u--4e-2At3g08940LHCB4.2 (light harvesting complex PSII)O.I.H.G.S.X.
0.4762.20.98rbah22f22_s_atrbah22f22--7e+0At5g51940NRPB6AO.I.H.G.S.X.
0.3849.50.98Contig22636_atContig22636--3e+0At2g14846protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3545.10.97Contig2247_atContig2247--1e+0At3g59190F-box family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.299.2GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
10.899.2GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
10.499.2GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
10.399.1GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
10.199.1GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
9.999.1GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
9.599.0GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
9.098.9GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
8.498.8GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
8.198.7GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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