Co-expression analysis

Gene ID	Contig4014_at
Gene name
Homology with Arabidopsis	Similar to At5g17170: ENH1 (enhancer of sos3-1) (HF=5e-10)
Module size	6 genes
NF	0.40
%ile	55.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	78.7	0.91	Contig4014_at	Contig4014	-	-	5e-10	At5g17170	ENH1 (enhancer of sos3-1)	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.93	HVSMEm0006I15r2_at	HVSMEm0006I15r2	-	-	1e+0	At5g27670	HTA7 (HISTONE H2A 7)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.93	Contig7708_at	Contig7708	-	-	2e-41	At1g09430	ACLA-3	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.93	Contig680_at	Contig680	-	-	1e-99	At4g30190	AHA2	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.93	Contig6644_at	Contig6644	-	-	8e-27	At4g22310	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.93	Contig3476_at	Contig3476	-	-	2e-169	At5g66760	SDH1-1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.3	99.3	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
10.1	99.1	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
7.8	98.6	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
7.0	98.4	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.8	98.3	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.5	97.6	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.2	97.4	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
5.2	97.4	GSM440967	Stressed palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.0	97.2	GSM238419	Endosperm 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.9	97.1	GSM238417	Endosperm 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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