Co-expression analysis

Gene ID Contig397_x_at
Gene name
Homology with ArabidopsisSimilar to At1g07920: elongation factor 1-alpha / EF-1-alpha (HF=0)
Module size 6 genes
NF 0.37
%ile 49.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.95Contig397_x_atContig397--0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.5066.90.95Contig11224_atContig11224--1e+1At5g59720HSP18.2 (heat shock protein 18.2)O.I.H.G.S.X.
0.3849.50.95Contig11162_atContig11162--3e-26At1g60490ATVPS34O.I.H.G.S.X.
0.3138.60.95Contig11659_atContig11659--5e-2At5g32440-O.I.H.G.S.X.
0.2935.50.95Contig1748_s_atContig1748--6e+0At2g35605SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2122.60.95Contig11107_atContig11107--7e-4At2g45140PVA12 (PLANT VAP HOMOLOG 12)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.299.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
10.799.2GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
8.298.7GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.198.0GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.697.7GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.397.4GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.897.0GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.496.6GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.396.4GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
3.695.3GSM372939genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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