Co-expression analysis

Gene ID	Contig3922_at
Gene name
Homology with Arabidopsis	Similar to At5g16070: chaperonin, putative (HF=2e-45)
Module size	8 genes
NF	0.59
%ile	81.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	86.0	0.90	Contig3922_at	Contig3922	-	-	2e-45	At5g16070	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.92	Contig15307_at	Contig15307	-	-	2e+0	At3g15357	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.93	Contig19461_at	Contig19461	-	-	3e-1	At1g04260	MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7)	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.94	Contig11253_at	Contig11253	-	-	1e+0	At4g34290	SWIB complex BAF60b domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.94	rbaal21g04_s_at	rbaal21g04	-	-	6e+0	At3g43480	-	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.96	Contig13941_at	Contig13941	-	-	6e+0	At5g37900	seven in absentia (SINA) family protein	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.95	Contig13943_s_at	Contig13943	-	-	4e+0	At4g00880	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	rbaal1d15_s_at	rbaal1d15	-	-	3e+0	At5g43700	ATAUX2-11 (AUXIN INDUCIBLE 2-11)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.1	98.7	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
5.8	97.8	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.8	97.0	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.1	96.2	GSM398270	HS41-1_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.3	94.6	GSM398259	Martin_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.2	94.3	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0	93.8	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0	93.8	GSM398260	Martin_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.9	93.4	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.8	93.1	GSM398272	HS41-1_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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