Co-expression analysis

Gene ID Contig3632_s_at
Gene name
Homology with ArabidopsisSimilar to At3g59990: MAP2B (METHIONINE AMINOPEPTIDASE 2B) (HF=3e-17)
Module size 7 genes
NF 0.33
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.85Contig3632_s_atContig3632--3e-17At3g59990MAP2B (METHIONINE AMINOPEPTIDASE 2B)O.I.H.G.S.X.
0.4053.10.91Contig2360_atContig2360--2e-27At1g31800CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)O.I.H.G.S.X.
0.3747.90.90EBpi03_SQ003_I06_atEBpi03_SQ003_I06--8e-1At5g16090-O.I.H.G.S.X.
0.3545.10.90Contig7755_s_atContig7755--2e-1At5g17165unknown proteinO.I.H.G.S.X.
0.3138.60.90Contig12167_atContig12167--2e+0At3g26660LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24)O.I.H.G.S.X.
0.2732.10.89Contig4973_s_atContig4973--6e+0At5g22950VPS24.1O.I.H.G.S.X.
0.119.40.88Contig14621_atContig14621--7e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.099.5GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
12.799.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
12.099.3GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
7.998.7GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
6.898.3GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
5.797.7GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.297.4GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.997.1GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.796.9GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.496.6GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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